STX16

STX16
Identifiers
Aliases	STX16, SYN16, syntaxin 16, SYN-16
External IDs	OMIM: 603666 MGI: 1923396 HomoloGene: 2791 GeneCards: STX16
Gene location (Human)
Chr.	Chromosome 20 (human)
End	58,679,526 bp
Gene location (Mouse)
Chr.	Chromosome 2 (mouse)
End	173,941,564 bp
RNA expression pattern
	Top expressed in
	right uterine tube; ; sural nerve; ; corpus callosum; ; superficial temporal artery; ; pituitary gland; ; anterior pituitary; ; canal of the cervix; ; inferior ganglion of vagus nerve; ; secondary oocyte; ; monocyte;
	Top expressed in
	hand; ; otolith organ; ; utricle; ; thymus; ; lens; ; cerebellar cortex; ; yolk sac; ; superior frontal gyrus; ; lateral hypothalamus; ; ventromedial nucleus;
	More reference expression data
	n/a
Gene ontology
Molecular function	SNAP receptor activity; protein binding; syntaxin binding; SNARE binding;
Cellular component	cytoplasm; integral component of membrane; Golgi apparatus; membrane; intracellular membrane-bounded organelle; Golgi cisterna; focal adhesion; trans-Golgi network; SNARE complex; endoplasmic reticulum; perinuclear region of cytoplasm; cytosol; trans-Golgi network membrane; Golgi membrane; endomembrane system; integral component of synaptic vesicle membrane;
Biological process	vesicle docking; retrograde transport, endosome to Golgi; protein transport; intracellular protein transport; vesicle fusion; Golgi ribbon formation; vesicle-mediated transport; transport;
	Sources:Amigo / QuickGO
Orthologs
	8675
	228960
	ENSG00000124222
	ENSMUSG00000027522
	O14662
	Q8BVI5
NM_001001433; NM_001001434; NM_001134772; NM_001134773; NM_001204868;
	NM_003763
NM_001102423; NM_001102424; NM_001102425; NM_172675; NM_001363029;
	NM_001363030; NM_001363031
	NP_001001433; NP_001128244; NP_001128245; NP_001191797; NP_003754
NP_001095893; NP_001095894; NP_001095895; NP_766263; NP_001349958;
	NP_001349959; NP_001349960
	Wikidata
View/Edit Human	View/Edit Mouse

Syntaxin-16 is a protein that in humans is encoded by the STX16 gene.^[5]^[6]^[7]^[8]

It has been associated with pseudohypoparathyroidism type Ib. Losing this gene causes loss of methylation at GNAS1 exon A/B.^[7]

Interactions

STX16 has been shown to interact with VAMP4.^[9]

References

1 2 3 GRCh38: Ensembl release 89: ENSG00000124222 - Ensembl, May 2017
1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000027522 - Ensembl, May 2017
↑ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
↑ Tang BL, Low DY, Lee SS, Tan AE, Hong W (Jan 1998). "Molecular cloning and localization of human syntaxin 16, a member of the syntaxin family of SNARE proteins". Biochemical and Biophysical Research Communications. 242 (3): 673–9. doi:10.1006/bbrc.1997.8029. PMID 9464276.
↑ Simonsen A, Bremnes B, Rønning E, Aasland R, Stenmark H (Mar 1998). "Syntaxin-16, a putative Golgi t-SNARE". European Journal of Cell Biology. 75 (3): 223–31. doi:10.1016/S0171-9335(98)80116-7. PMID 9587053.
1 2 Linglart A, Gensure RC, Olney RC, Jüppner H, Bastepe M (May 2005). "A novel STX16 deletion in autosomal dominant pseudohypoparathyroidism type Ib redefines the boundaries of a cis-acting imprinting control element of GNAS". American Journal of Human Genetics. 76 (5): 804–14. doi:10.1086/429932. PMC 1199370. PMID 15800843.
↑ "Entrez Gene: STX16 syntaxin 16".
↑ Mallard F, Tang BL, Galli T, Tenza D, Saint-Pol A, Yue X, Antony C, Hong W, Goud B, Johannes L (Feb 2002). "Early/recycling endosomes-to-TGN transport involves two SNARE complexes and a Rab6 isoform". The Journal of Cell Biology. 156 (4): 653–64. doi:10.1083/jcb.200110081. PMC 2174079. PMID 11839770.

Yu Y, Zhang C, Zhou G, Wu S, Qu X, Wei H, Xing G, Dong C, Zhai Y, Wan J, Ouyang S, Li L, Zhang S, Zhou K, Zhang Y, Wu C, He F (Aug 2001). "Gene expression profiling in human fetal liver and identification of tissue- and developmental-stage-specific genes through compiled expression profiles and efficient cloning of full-length cDNAs". Genome Research. 11 (8): 1392–403. doi:10.1101/gr.175501. PMC 311073. PMID 11483580.
Mallard F, Tang BL, Galli T, Tenza D, Saint-Pol A, Yue X, Antony C, Hong W, Goud B, Johannes L (Feb 2002). "Early/recycling endosomes-to-TGN transport involves two SNARE complexes and a Rab6 isoform". The Journal of Cell Biology. 156 (4): 653–64. doi:10.1083/jcb.200110081. PMC 2174079. PMID 11839770.
Dulubova I, Yamaguchi T, Gao Y, Min SW, Huryeva I, Südhof TC, Rizo J (Jul 2002). "How Tlg2p/syntaxin 16 'snares' Vps45". The EMBO Journal. 21 (14): 3620–31. doi:10.1093/emboj/cdf381. PMC 126126. PMID 12110575.
Clark AG, Glanowski S, Nielsen R, Thomas PD, Kejariwal A, Todd MA, Tanenbaum DM, Civello D, Lu F, Murphy B, Ferriera S, Wang G, Zheng X, White TJ, Sninsky JJ, Adams MD, Cargill M (Dec 2003). "Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios". Science. 302 (5652): 1960–3. Bibcode:2003Sci...302.1960C. doi:10.1126/science.1088821. PMID 14671302. S2CID 6682593.
Tai G, Lu L, Wang TL, Tang BL, Goud B, Johannes L, Hong W (Sep 2004). "Participation of the syntaxin 5/Ykt6/GS28/GS15 SNARE complex in transport from the early/recycling endosome to the trans-Golgi network". Molecular Biology of the Cell. 15 (9): 4011–22. doi:10.1091/mbc.E03-12-0876. PMC 515336. PMID 15215310.
Colland F, Jacq X, Trouplin V, Mougin C, Groizeleau C, Hamburger A, Meil A, Wojcik J, Legrain P, Gauthier JM (Jul 2004). "Functional proteomics mapping of a human signaling pathway". Genome Research. 14 (7): 1324–32. doi:10.1101/gr.2334104. PMC 442148. PMID 15231748.
Amessou M, Fradagrada A, Falguières T, Lord JM, Smith DC, Roberts LM, Lamaze C, Johannes L (Apr 2007). "Syntaxin 16 and syntaxin 5 are required for efficient retrograde transport of several exogenous and endogenous cargo proteins". Journal of Cell Science. 120 (Pt 8): 1457–68. doi:10.1242/jcs.03436. PMC 1863825. PMID 17389686.

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[refGRCh38Ensembl-1] 1 2 3 GRCh38: Ensembl release 89: ENSG00000124222 - Ensembl, May 2017

[refGRCm38Ensembl-2] 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000027522 - Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[pmid9464276-5] Tang BL, Low DY, Lee SS, Tan AE, Hong W (Jan 1998). "Molecular cloning and localization of human syntaxin 16, a member of the syntaxin family of SNARE proteins". Biochemical and Biophysical Research Communications. 242 (3): 673–9. doi:10.1006/bbrc.1997.8029. PMID 9464276.

[pmid9587053-6] Simonsen A, Bremnes B, Rønning E, Aasland R, Stenmark H (Mar 1998). "Syntaxin-16, a putative Golgi t-SNARE". European Journal of Cell Biology. 75 (3): 223–31. doi:10.1016/S0171-9335(98)80116-7. PMID 9587053.

[pmid15800843-7] 1 2 Linglart A, Gensure RC, Olney RC, Jüppner H, Bastepe M (May 2005). "A novel STX16 deletion in autosomal dominant pseudohypoparathyroidism type Ib redefines the boundaries of a cis-acting imprinting control element of GNAS". American Journal of Human Genetics. 76 (5): 804–14. doi:10.1086/429932. PMC 1199370. PMID 15800843.

[entrez-8] "Entrez Gene: STX16 syntaxin 16".

[pmid11839770-9] Mallard F, Tang BL, Galli T, Tenza D, Saint-Pol A, Yue X, Antony C, Hong W, Goud B, Johannes L (Feb 2002). "Early/recycling endosomes-to-TGN transport involves two SNARE complexes and a Rab6 isoform". The Journal of Cell Biology. 156 (4): 653–64. doi:10.1083/jcb.200110081. PMC 2174079. PMID 11839770.

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Interactions

References

Further reading