| Desulfovibrio | |
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| Scientific classification | |
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| Genus: | Desulfovibrio Kluyver & van Niel 1936 |
| Type species | |
| Desulfovibrio desulfuricans (Beijerinck 1895) Kluyver & van Niel 1936 | |
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Desulfovibrio is a genus of Gram-negative sulfate-reducing bacteria. Desulfovibrio species are commonly found in aquatic environments with high levels of organic material, as well as in water-logged soils, and form major community members of extreme oligotrophic habitats such as deep granitic fractured rock aquifers.
High amounts of Desulfovibrio bacteria have been associated with inflammatory bowel disease, bacteremia infections and Parkinson's disease.[1][2]
Some Desulfovibrio species have in recent years been shown to have bioremediation potential for toxic radionuclides such as uranium by a reductive bioaccumulation process, such as converting highly water-soluble U(VI) to relatively insoluble U(IV) precipitate, thus removing the toxic uranium from contaminated water.[3]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[4] and National Center for Biotechnology Information (NCBI)[5]
| 16S rRNA based LTP_08_2023[6][7][8] | 120 marker proteins based GTDB 08-RS214[9][10][11] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Unassigned species:
- "D. caledoniensis" Tardy-Jacquenod et al. 1996
- "D. cavernae" Sass & Cypionka 2004
- "D. diazotrophica" Sayavedra et al. 2021
- "D. halohydrocarbonoclasticus" Zobell 1947
- "D. hontreensis" Tarasov et al. 2015
- "D. mangrovi" Zhou, Zhang & Li 2023
- "D. multispirans" Czechowski et al. 1984
- "D. oliviopondense" Qatabi Sr. 2007
- "D. oryzae" Ouattara et al. 2000b
- "D. rubentschikii" (Baars 1930) ZoBell 1948
- "D. singaporenus" Sheng et al. 2007
See also
References
- ↑ Hong-Xia Fan, Shuo Sheng, Feng Zhang (2022). "New hope for Parkinson's disease treatment: Targeting gut microbiota". CNS Neuroscience & Therapeutics. 28 (11): 1675–1688. doi:10.1111/cns.13916. PMC 9532916. PMID 35822696.
{{cite journal}}: CS1 maint: multiple names: authors list (link) - ↑ Li, Zhe; Liang, Hongfeng; Hu, Yingyu (2023). "Gut bacterial profiles in Parkinson's disease: A systematic review". CNS Neuroscience & Therapeutics. 29 (1): 140–157. doi:10.1111/cns.13990. PMC 9804059. PMID 36284437.
{{cite journal}}: CS1 maint: multiple names: authors list (link) - ↑ Lovley, Derek R.; Phillips, Elizabeth J. P. (November 1992). "Bioremediation of uranium contamination with enzymatic uranium reduction". Environmental Science & Technology. 26 (11): 2228–2234. Bibcode:1992EnST...26.2228L. doi:10.1021/es00035a023. ISSN 0013-936X.
- ↑ J.P. Euzéby. "Desulfovibrio". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.
- ↑ Sayers; et al. "Desulfovibrio". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.
- ↑ "The LTP". Retrieved 20 November 2023.
- ↑ "LTP_all tree in newick format". Retrieved 20 November 2023.
- ↑ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
- ↑ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ↑ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ↑ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
- Madigan M; Martinko J, eds. (2005). Brock Biology of Microorganisms (11th ed.). Prentice Hall. ISBN 0-13-144329-1.
External links
- Amrani, Amira; Bergon, Aurelie; Holota, Helene; Tamburini, Christian; Garel, Marc; Ollivier, Bernard; Imbert, Jean; Dolla, Alain (12 September 2014). "Transcriptomics Reveal Several Gene Expression Patterns in the Piezophile Desulfovibrio hydrothermalis in Response to Hydrostatic Pressure". PLOS ONE. 9 (9): e106831. Bibcode:2014PLoSO...9j6831A. doi:10.1371/journal.pone.0106831. PMC 4162548. PMID 25215865.
- Czechowski, Melvin; Rossmore, H.W. (1981). Developments in Industrial Microbiology (PDF). Archived from the original (PDF) on 2010-01-03. Retrieved 2010-10-20.